diff --git a/.github/workflows/pipeline.yml b/.github/workflows/pipeline.yml index d6f5e92d..1500a938 100644 --- a/.github/workflows/pipeline.yml +++ b/.github/workflows/pipeline.yml @@ -176,7 +176,7 @@ jobs: papermill notebooks/1-single-node.ipynb notebooks/1-single-node-out.ipynb -k python3 flux start papermill notebooks/2-hpc-cluster.ipynb notebooks/2-hpc-cluster-out.ipynb -k python3 flux start papermill notebooks/3-hpc-job.ipynb notebooks/3-hpc-job-out.ipynb -k python3 - papermill notebooks/4-developer.ipynb notebooks/4-developer-out.ipynb -k python3 + papermill notebooks/5-developer.ipynb notebooks/5-developer-out.ipynb -k python3 notebooks_integration: needs: [black] @@ -198,8 +198,8 @@ jobs: shell: bash -l {0} timeout-minutes: 20 run: | - flux start papermill notebooks/5-1-gpaw.ipynb notebooks/5-1-gpaw-out.ipynb -k python3 - flux start papermill notebooks/5-2-quantum-espresso.ipynb notebooks/5-2-quantum-espresso-out.ipynb -k python3 + flux start papermill notebooks/4-1-gpaw.ipynb notebooks/4-1-gpaw-out.ipynb -k python3 + flux start papermill notebooks/4-2-quantum-espresso.ipynb notebooks/4-2-quantum-espresso-out.ipynb -k python3 unittest_flux_mpich: needs: [black] diff --git a/README.md b/README.md index e7756136..8c3c93e9 100644 --- a/README.md +++ b/README.md @@ -144,8 +144,8 @@ as hierarchical job scheduler within the allocations. * [SLURM with Flux](https://executorlib.readthedocs.io/en/latest/3-hpc-job.html#slurm-with-flux) * [Flux](https://executorlib.readthedocs.io/en/latest/3-hpc-job.html#flux) * [Application](https://executorlib.readthedocs.io/en/latest/application.html) - * [GPAW](https://executorlib.readthedocs.io/en/latest/5-1-gpaw.html) - * [Quantum Espresso](https://executorlib.readthedocs.io/en/latest/5-2-quantum-espresso.html) + * [GPAW](https://executorlib.readthedocs.io/en/latest/4-1-gpaw.html) + * [Quantum Espresso](https://executorlib.readthedocs.io/en/latest/4-2-quantum-espresso.html) * [Trouble Shooting](https://executorlib.readthedocs.io/en/latest/trouble_shooting.html) * [Filesystem Usage](https://executorlib.readthedocs.io/en/latest/trouble_shooting.html#filesystem-usage) * [Firewall Issues](https://executorlib.readthedocs.io/en/latest/trouble_shooting.html#firewall-issues) @@ -154,14 +154,14 @@ as hierarchical job scheduler within the allocations. * [Python Version](https://executorlib.readthedocs.io/en/latest/trouble_shooting.html#python-version) * [Resource Dictionary](https://executorlib.readthedocs.io/en/latest/trouble_shooting.html#resource-dictionary) * [SSH Connection](https://executorlib.readthedocs.io/en/latest/trouble_shooting.html#ssh-connection) -* [Support & Contribution](https://executorlib.readthedocs.io/en/latest/4-developer.html) - * [Issues](https://executorlib.readthedocs.io/en/latest/4-developer.html#issues) - * [Pull Requests](https://executorlib.readthedocs.io/en/latest/4-developer.html#pull-requests) - * [License](https://executorlib.readthedocs.io/en/latest/4-developer.html#license) - * [Modules](https://executorlib.readthedocs.io/en/latest/4-developer.html#modules) - * [Interface Class Hierarchy](https://executorlib.readthedocs.io/en/latest/4-developer.html#interface-class-hierarchy) - * [Test Environment](https://executorlib.readthedocs.io/en/latest/4-developer.html#test-environment) - * [Communication](https://executorlib.readthedocs.io/en/latest/4-developer.html#communication) - * [External Libraries](https://executorlib.readthedocs.io/en/latest/4-developer.html#external-libraries) - * [External Executables](https://executorlib.readthedocs.io/en/latest/4-developer.html#external-executables) +* [Support & Contribution](https://executorlib.readthedocs.io/en/latest/5-developer.html) + * [Issues](https://executorlib.readthedocs.io/en/latest/5-developer.html#issues) + * [Pull Requests](https://executorlib.readthedocs.io/en/latest/5-developer.html#pull-requests) + * [License](https://executorlib.readthedocs.io/en/latest/5-developer.html#license) + * [Modules](https://executorlib.readthedocs.io/en/latest/5-developer.html#modules) + * [Interface Class Hierarchy](https://executorlib.readthedocs.io/en/latest/5-developer.html#interface-class-hierarchy) + * [Test Environment](https://executorlib.readthedocs.io/en/latest/5-developer.html#test-environment) + * [Communication](https://executorlib.readthedocs.io/en/latest/5-developer.html#communication) + * [External Libraries](https://executorlib.readthedocs.io/en/latest/5-developer.html#external-libraries) + * [External Executables](https://executorlib.readthedocs.io/en/latest/5-developer.html#external-executables) * [Interface](https://executorlib.readthedocs.io/en/latest/api.html) diff --git a/docs/_toc.yml b/docs/_toc.yml index 5abb79fb..ca7887a9 100644 --- a/docs/_toc.yml +++ b/docs/_toc.yml @@ -7,8 +7,8 @@ chapters: - file: 3-hpc-job.ipynb - file: application.md sections: - - file: 5-1-gpaw.ipynb - - file: 5-2-quantum-espresso.ipynb + - file: 4-1-gpaw.ipynb + - file: 4-2-quantum-espresso.ipynb - file: trouble_shooting.md -- file: 4-developer.ipynb +- file: 5-developer.ipynb - file: api.rst diff --git a/notebooks/5-1-gpaw.ipynb b/notebooks/4-1-gpaw.ipynb similarity index 100% rename from notebooks/5-1-gpaw.ipynb rename to notebooks/4-1-gpaw.ipynb diff --git a/notebooks/5-2-quantum-espresso.ipynb b/notebooks/4-2-quantum-espresso.ipynb similarity index 100% rename from notebooks/5-2-quantum-espresso.ipynb rename to notebooks/4-2-quantum-espresso.ipynb diff --git a/notebooks/4-developer.ipynb b/notebooks/5-developer.ipynb similarity index 100% rename from notebooks/4-developer.ipynb rename to notebooks/5-developer.ipynb